YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AQY1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNDSNDTD KQHTRLDPTG VDDAYIPPEQ PETKHHRFKI SRDTLRDHFI AAVGEFCGTF  60
   61 MFLWCAYVIC NVANHDVALV AAPDGSHPGQ LIMIAIGFGF SVMFSIWCFA GVSGGALNPA 120
  121 MSLSLCLARA VSPTRCVVMW VSQIVAGMAA GGAASAMTPG EVLFANSLGL GCSRTRGLFL 180
  181 EMFGTAILCL TVLMTAVEKR ETNFMAALPI GISLFIAHVA LTAYTGTGVN PARSLGAAVA 240
  241 ARYFPHYHWI YWIGTLLGSI LAWSVWQLLQ ILDYTTYVTA EKAASTKEKA QKKGETSSSS 300
  301 AVAEV

Type	Start	End	Confidence
Cytoplasmic	1	47	0.98
Transmembrane Helix	48	70	0.90
Non-Cytoplasmic	71	90	0.92
Transmembrane Helix	91	116	0.87
Cytoplasmic	117	135	0.85
Transmembrane Helix	136	157	0.92
Non-Cytoplasmic	158	176	0.88
Transmembrane Helix	177	197	0.93
Cytoplasmic	198	203	0.91
Transmembrane Helix	204	226	0.89
Non-Cytoplasmic	227	247	0.89
Transmembrane Helix	248	266	0.95
Cytoplasmic	267	305	0.92