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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111021149, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDRATTTTA ERPAGPRIPG PVAPGAPGSK PNDLWPSTKR LLRRLGPHRI AVGIVILVAA  60
   61 VSVVLTSIAP RMLGQGTNLI FDGIIGAQLP AGMSKDQAVA ALRADGQNTF ADMVSGMAVV 120
  121 PGVGIDFSAL GRVLAIVLAL YLGSAVFMWL SGFLLNIIVQ GVVKNLRAEV ERKIHRLPLR 180
  181 YFDSHSRGDL LSRVTNDIDN VSQSLQQTMS QLIVSAMTVI GILVMMIVIS PLLALIAVLT 240
  241 VPLSILVTAQ IAKRSKTHFV SQWKSTGALN SHVEEAYTGH ELVTVFGRSR EVEARFEEQN 300
  301 EALYQASYRA QFISGLIMPA IMFLGNLNFV AIAVLGGMRV ASGTMSLGDV QAFIQYSRQF 360
  361 TQPLTQIGAM VNLMQSGVAS AERVFAILDE DEEEPDLAEA PTPAEPRDAG RVHTFGRVEF 420
  421 SDVSFSYSPE KPLIENLSLV AEPGQMVAIV GPTGAGKTTL VNLILRFYEL DGGKILLDGV 480
  481 DTAEMSRDDL RSRIGMVLQD AWLFGGTIRD NIAYGRPDAT EDEIQAAARI SYVDRFVHSL 540
  541 PDGYDTVIDE EGSNISAGEK QLITIARAFI SQPSILILDE ATSSVDTRTE LLVQHATAVL 600
  601 RSDRTSFVIA HRLSTIRDAD LIVVMEDGRI VEQGSHDDLL LTRGAYYRLY NSQFVGAEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle