YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190408105
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIEYSVIVP AYHEKLNIKP LTTRLFAGMS PEMAKKTELI FVDDNSQDGS VEEVDALAHQ  60
   61 GYNVRIIVRT NERGLSSAVL KGFYEAKGQY LVCMDADLQH PPETVPKLFE SLHDHAFTLG 120
  121 TRYAPGVGID KDWPMYRRVI SSTARMMARP LTIASDPMSG FFGLQKKYLE NCNPRDINSQ 180
  181 GFKIALELLA KLPLPRDPRV AIGEVPFTFG VRTEGESKLS GKVIIQYLQQ LKELYVFKFG 240
  241 ANNLILFITF WSILFFYVCY QLYHLVF

Type	Start	End	Confidence
Cytoplasmic	1	238	0.80
Transmembrane Helix	239	260	0.85
Non-Cytoplasmic	261	267	0.61