YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NCE102
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLALADNILR IINFLFLVIS IGLISSLLNT QHRHSSRVNY CMFACAYGIF TDSLYGVFAN  60
   61 FIEPLAWPLV LFTLDFLNFV FTFTAGTVLA VGIRAHSCNN SSYVDSNKIT QGSGTRCRQA 120
  121 QAAVAFLYFS CAIFLAKTLM SVFNMISNGA FGSGSFSKRR RTGQVGVPTI SQV

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.84
Transmembrane Helix	8	29	0.92
Cytoplasmic	30	37	0.78
Transmembrane Helix	38	59	0.86
Non-Cytoplasmic	60	70	0.68
Transmembrane Helix	71	93	0.83
Cytoplasmic	94	123	0.81
Transmembrane Helix	124	146	0.81
Non-Cytoplasmic	147	173	0.83