YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YP147_YEAST
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVKEYTKSK LPCSILNIKP TVTKSGEDAP LLVWIPGNPG LLYYYQEMLH HLHLKHPDWE  60
   61 ILGISHAGMT LNAHSNTPIF SLQDQVDHQV EVINNFSCKN RKIIIMGHSV GAYIVQKVCL 120
  121 SNKLVGSVQK VGLVTPTVMD IHTSEMGIKM TAALRYIPPL AHVVSLFSYI FFYWILSEGF 180
  181 SRFIIDKFMG CGSTGYQAVL STRIFLTHRQ FVRQSLGLAA QEMEEITTNW EFQDRFINYC 240
  241 EENGISIWFL FSSNDHWVSG KTRSHLSDYY KDKVKQERLK IDVTDKIPHS FVVKHAEYAI 300
  301 NAFF

Type	Start	End	Confidence
Cytoplasmic	1	155	0.90
Transmembrane Helix	156	176	0.88
Non-Cytoplasmic	177	304	0.53