YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YPR142C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGSFLSYAF RCDDKIAFTA AENPVEPSSC LLFFDFFFLG KSSSSSSSSS SSSASLCSLS  60
   61 IILDDSSLEL FCSSSSASSP SIIVSFSGSL LNSWLPLFLF SRPNSAFFLV LFLSLVSTLC 120
  121 LEPMINYVLI FLRLLYRFIH SICLLPFLIS YGHRILDFFL SKFSNKRVME IHQNESQTKS 180
  181 KQTLFTI

Type	Start	End	Confidence
Cytoplasmic	1	76	0.67
Transmembrane Helix	77	100	0.70
Non-Cytoplasmic	101	105	0.51
Transmembrane Helix	106	129	0.86
Cytoplasmic	130	133	0.51
Transmembrane Helix	134	155	0.80
Non-Cytoplasmic	156	187	0.54