YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YPR136C
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVRLFSPTL VKLCFASDIR SLSPKYLKTR PCCSATSSFN LDAMISLSKS PASKLLYSSI  60
   61 VLSLRLFKSF SSAFLLSVKM SLASLFRFSR YCFASLLLLS AGFSPSNSSS DSNASSSSET 120
  121 SSCSSSFEDG SVISSSTVGF DGLTSPLDLF LFFCWVTSDI FSRFSIILKC

Type	Start	End	Confidence
Cytoplasmic	1	85	0.72
Transmembrane Helix	86	105	0.70
Non-Cytoplasmic	106	146	0.88
Transmembrane Helix	147	167	0.57
Cytoplasmic	168	170	0.70