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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111020526, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRGTDIAAP PDSQIELAIG GMTCASCANR IERKLNKLDG VTATVNYATE KARVHYDAAD  60
   61 VSPEDLVATV EQAGYTARLP EVKPPAPEEE DPAAELRQRL LASAVLTVPV IAMAMIPALQ 120
  121 FTNWQWLSLT LAAPVVVWGA WPFHKAAWTN LRHGTATMDT LVSMGTLAAF GWSLYALFWG 180
  181 TAGMPGMTHP FELTIARVDG TGNIYLEAAA GVTTFILAGR FFEARAKRRA GAALRALLEL 240
  241 GAKEVSVLRD GTEQLIGIDQ LDVGDLFVVR PGEKIATDGV VVEGSSAVDA SMLTGESVPV 300
  301 EVSPDSQVAG ATVNVGGRIV VRASRIGADT QLAQMAWMVE DAQTGKAEVQ RLADRISGIF 360
  361 VPIVIALSVA TLGFWIGTGG SIAAAFTAAV AVLIIACPCA LGLATPTALM VGTGRGAQLG 420
  421 ILIKGPEVLE STRRVDTVVV DKTGTVTTGT MSLHDVVAAD GQDEEQVLRY AGALEDASEH 480
  481 PIARAITRGA KERLTTLPAV EQFTNIAGLG VQGMIDGHAV VIGRAKLLRD WSLQLTTELQ 540
  541 RVADAAESEG KTAVGIGWDG KARGVLVVAD TVKPTSREAV AQFRELGLTP IMLTGDNTSA 600
  601 ARAIAAQVGI GEVVAEVLPQ DKVDVIKRLQ ADGKVVAMVG DGVNDAAALA QADLGLAMGT 660
  661 GTDVAIEASD LTLVRGDLRA AADAIRLSRR TLSTIKGNLF WAFAYNVAAL PLAAAGLLNP 720
  721 MLAGAAMAFS SVFVVSNSLR LRRFQPLTTP TRGEHS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle