YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YP114_YEAST
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVLLSLPQP ELFKTTVIPF LANRNIIKSE AILSNLHSIF YVAIFYHIWF LFGKWILFPH  60
   61 LVKWKLDYDQ KHNVKKDEKT TSERQAQHYK KKYTSLINQS SVHLISLLQS IVVLYYSLKF 120
  121 LLDPKASAEP YQTSHSRVFT ENRDTQVICI FAIGYFVWDI YISTMYSTFP FVVHGIISTV 180
  181 VFCIGLKPYI QYYAPVFLMF ELSNPSLNFR WFGIKFLPQK SKFCSLLLLL NNLTLMVVFF 240
  241 AARIAWGWFQ IGKLCYDFYQ VRNEPGFLVF DTIVILAGNF VLDILNVIWF STMVSVAAKV 300
  301 LKKGESVDKV TKNEQ

Type	Start	End	Confidence
Cytoplasmic	1	32	0.80
Transmembrane Helix	33	51	0.87
Non-Cytoplasmic	52	101	0.76
Transmembrane Helix	102	122	0.71
Cytoplasmic	123	143	0.84
Transmembrane Helix	144	162	0.73
Non-Cytoplasmic	163	169	0.56
Transmembrane Helix	170	190	0.74
Cytoplasmic	191	222	0.72
Transmembrane Helix	223	246	0.87
Non-Cytoplasmic	247	267	0.92
Transmembrane Helix	268	290	0.85
Cytoplasmic	291	315	0.88