YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YPR109W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNFESTAEG NLSIGNKRVY ELRKRNFQRN LVNNLSFLGY VLISLEYIKY DRTVWTLITR  60
   61 AIVQSLISSP FPSDAKLRRL ATLGADNNTT GVATLPGGRS IRFPGMFGTE MLYNSSSEAE 120
  121 QQDHDDTAIV SMKKQIRKFL FHGCLSLNML FIILTILFPI DFFEPLSGSE PVDDGPKNTP 180
  181 SPFSNSDGLL LGERRGGLFL QMIGERLPKS NFSGNLGLVM FEFSILIVQF TLFSLTCVVL 240
  241 ADLDFEEPER LEPVNSDGYD GSVIVARIPL NKTMNAILND GNINDNNENA SNSV

Type	Start	End	Confidence
Cytoplasmic	1	138	0.96
Transmembrane Helix	139	160	0.94
Non-Cytoplasmic	161	219	0.96
Transmembrane Helix	220	241	0.79
Cytoplasmic	242	294	0.86