YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VPS69
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTYIYIYTV YIQMVAFSPY RIVLPFVAFV DLASFSSFRS YQAFLRPFLR PFRHQTCSSY  60
   61 FALDLDFASA FVVPAASFVE SLLAYQAYSA YQACLAYPAC LACQAS

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.68
Transmembrane Helix	17	41	0.72
Cytoplasmic	42	59	0.62
Transmembrane Helix	60	78	0.47
Non-Cytoplasmic	79	106	0.56