YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IRC16
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCFSISFNR ASFFSAAAPC TSSIPDFALI RPGVAMDSSL DEKNIHRPMI PNAATILMAW  60
   61 LLLTICFIPS FLAQSVQTFL FTNHQPSRLL VFITHVYCLM IKPFVLYFWF LFPLRLPGG

Type	Start	End	Confidence
Cytoplasmic	1	52	0.62
Transmembrane Helix	53	73	0.90
Non-Cytoplasmic	74	90	0.58
Transmembrane Helix	91	112	0.92
Cytoplasmic	113	119	0.62