YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|151942816
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGIYRILAS FVPLLGLLFA FHDDDMIDTV TIIKTVYETV TSTSTAPAPA ATKSVSEKKL  60
   61 DDTKLTLQVI QTMVSCFSVG ENPANMISCG LGVVILMFSL IIELINKLEN DGINEPQRLY 120
  121 DLIKPKYVEL PSNYVNEKIK TTFEPLDLYL GVNMNTSGSE LNQNCLILKL GEKTALPFPG 180
  181 LAQQICYTKG ASNEFTNYKL SDIQGNLNEN SQGIANGVFQ KISNIRKISG NFKSQLYQIS 240
  241 EKITDENWDG SAVGFTAHGR EKGPNKSQIS VSFYRDN

Type	Start	End	Confidence
Signal Peptide	1	20	0.80
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	277	0.91