YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YPL264C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	13	0.90
Transmembrane Helix	14	34	0.86
Non-Cytoplasmic	35	53	0.82
Transmembrane Helix	54	72	0.92
Cytoplasmic	73	89	0.97
Transmembrane Helix	90	110	0.95
Non-Cytoplasmic	111	116	0.80
Transmembrane Helix	117	137	0.93
Cytoplasmic	138	144	0.90
Transmembrane Helix	145	164	0.94
Non-Cytoplasmic	165	188	0.92
Transmembrane Helix	189	209	0.96
Cytoplasmic	210	221	0.76
Transmembrane Helix	222	243	0.91
Non-Cytoplasmic	244	253	0.79
Transmembrane Helix	254	272	0.94
Cytoplasmic	273	282	0.75
Transmembrane Helix	283	301	0.89
Non-Cytoplasmic	302	307	0.73
Transmembrane Helix	308	327	0.91
Cytoplasmic	328	353	0.96

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLQRISKDY LKPNYGLILL IVSYFFNSSM VVSTKVLEND PLETSQSRIN PLQILLVRMS  60
   61 ITYCCTLVYM HWNKQSVPDI PWGPAPCRKW LILRGIMGFF GVFGMYFSLM YLSISDAVLI 120
  121 TFMSPTLTIF LSFLLLGEPF SKLEALGSLI SFSGVVLIIR PTFLFGEQTQ GQQSPQDDIV 180
  181 ETQNPKLRLI AIGVSLLGVC GLSSVYIIIR YIGNKAHAIM SVSYFSLVTT VVAALGVLLI 240
  241 PSMSLQLPHS WKQWGLFLNL GISGFIHQIL LTMGIQRERA GRGSLMTYTQ VIYAVFWDVV 300
  301 LFHHWPNIWT WCGMAVIVSS TIWVINMRAS KQNVVATAEL LSTSDFELDD LED