YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HUT1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	6	0.89
Transmembrane Helix	7	25	0.95
Non-Cytoplasmic	26	42	0.88
Transmembrane Helix	43	64	0.90
Cytoplasmic	65	82	0.89
Transmembrane Helix	83	101	0.60
Non-Cytoplasmic	102	108	0.53
Transmembrane Helix	109	128	0.52
Cytoplasmic	129	137	0.63
Transmembrane Helix	138	155	0.71
Non-Cytoplasmic	156	172	0.48
Transmembrane Helix	173	190	0.48
Cytoplasmic	191	210	0.90
Transmembrane Helix	211	235	0.87
Non-Cytoplasmic	236	252	0.96
Transmembrane Helix	253	274	0.91
Cytoplasmic	275	280	0.81
Transmembrane Helix	281	302	0.86
Non-Cytoplasmic	303	307	0.74
Transmembrane Helix	308	327	0.81
Cytoplasmic	328	339	0.86

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSTSSLVI CAIGIYATFL TWALVQEPLA TRTWPNSMGK FQFPNVISLI QASVAMMMGY  60
   61 LYLNWKKVEY PPRKMIKDHW KQLMLISFTQ SSSGPLATTS LKHVDYLTYM LAKSCKMIPV 120
  121 LLVHLLLYRT PIASQKKVVA LLVSLGVTIF TIGGNDGKKL KRSFNESGND NKLQGFGLLF 180
  181 SSLFLDGLTN ATQDKLLKAN KAKEKGKQTL ITGAHLMFTL NLFVILWNIL YFIVIDCKQW 240
  241 DNAVSVLTMD PQVWGYLMLY SFCGAMGQCF IFYTLEQFGS LVLIMITVTR KMVSMILSII 300
  301 VFGKSVRFQQ WVGMFIVFGG ITWEALNKKK ANIPKAKSA