YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YPL238C
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLELALGVPS LLSASTLSRP ALASSFSNAS TLLSFVFFFF FFKDSSPKAS AMSSVGSFSA  60
   61 SASAETLLDF FFFFFNPANK SSPEPFSLPF TAASKSSGIT FLVFFFFFSA GSNPNSAAKS 120
  121 EDISCVLII

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.55
Transmembrane Helix	21	42	0.79
Cytoplasmic	43	50	0.54
Transmembrane Helix	51	73	0.69
Non-Cytoplasmic	74	90	0.65
Transmembrane Helix	91	110	0.78
Cytoplasmic	111	129	0.58