YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TFP3
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTQLASNIY APLYAPFFGF AGCAAAMVLS CLGAAIGTAK SGIGIAGIGT FKPELIMKSL  60
   61 IPVVMSGILA IYGLVVAVLI AGNLSPTEDY TLFNGFMHLS CGLCVGFACL SSGYAIGMVG 120
  121 DVGVRKYMHQ PRLFVGIVLI LIFSEVLGLY GMIVALILNT RGSE

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.83
Transmembrane Helix	17	39	0.92
Cytoplasmic	40	59	0.80
Transmembrane Helix	60	81	0.94
Non-Cytoplasmic	82	95	0.81
Transmembrane Helix	96	118	0.91
Cytoplasmic	119	132	0.82
Transmembrane Helix	133	157	0.90
Non-Cytoplasmic	158	164	0.86