YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRM3
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAMKEDNAA LITLKKNNDQ EKLRVHKLTD ASSNSADGFV INKAKNGGPL NKKSLVNNEQ  60
   61 HIKKAVSPGR VRKHKTTTSS TKSRTKSKKK DASESKVQRE NKGSFYQGAI FGSFLGAAVT 120
  121 TVLSNLAVKA LQN

Type	Start	End	Confidence
Cytoplasmic	1	104	0.74
Transmembrane Helix	105	128	0.77
Non-Cytoplasmic	129	133	0.78