YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110817658, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWYWLFKYVF LGPVLWGLGR PTVEGTENIP AEGGAILASN HQAVLDSFFL PLRVPRRITF  60
   61 LAKSEYFTGT GLKGAFQRWF FSVVGQVPID RTGADAAQDA LNAGLRVLSQ GKLLGIYPEG 120
  121 TRSPDGRLYK GKTGLARMAL ESGVKVIPVA MIGTEKVNPI GSRVWRPSKV TIRVGEPIDF 180
  181 SRFEGMGGNR FVERAVTDEV MYKLMKLSGQ EYVDIYAATL KKKAPAADAS VADVAPASDA 240
  241 TTVTRLPDTR AS

Type	Start	End	Confidence
Signal Peptide	1	25	0.65
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	252	0.99