YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SVS1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFKILCSLL LVTSNFASAL YVNETTSYTP YTKTLTPTYS VSPQETTLTY SDETTTFYIT  60
   61 STFYSTYWFT TSQSAAIIST PTASTPTAST PSLTTSTNEY TTTYSDTDTT YTSTLTSTYI 120
  121 ITLSTESANE KAEQISTSVT EIASTVTESG STYTSTLTST LLVTVYNSQA SNTIATSTAG 180
  181 DAASNVDALE KLVSAEHQSQ MIQTTSADEQ YCSASTKYVT VTAAAVTEVV TTTAEPVVKY 240
  241 VTITADASNV TGSANNGTHI

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	260	0.99