YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRM4
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIADSSVLKK HTAIKRSTRI ISLTLVLLGV FSFLLLTWND SLEFYNSADP SENKKNSEEE  60
   61 SEKKFVYKLP NLLKTADSFL SNENELNFQK VKEEISNIQS EVEVDIPEPS SKATSKFSSR 120
  121 SFQTDNVVTA TTTTTLNPRS SSLALQKNCD HKKFDPRTDF LDIIRTSPAV LFIKSSQADS 180
  181 IFLKNLLQRE FEISPELATV DLEKHSHGYE LEKYIKQNKL NIDTSAALES IQSPYLFLNG 240
  241 ISVINRGMVR DIIEPHSKGL LLPLLKSEAR GNLLVEKKDI PSNS

Type	Start	End	Confidence
Cytoplasmic	1	19	0.76
Transmembrane Helix	20	38	0.78
Non-Cytoplasmic	39	284	0.99