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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PXA1
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTLAAPAK LKSLLLNLHT HCIGLHVNDV TPKVYFKLLI RHLLQISRSN AAHPKLRRRA  60
   61 QILLVSLFLS GVTLFSGVTY STFKIILKCY KFYKFPWKRR NRRPLIRRTR SQMQLDSGAR 120
  121 IMYIPEVELV DRQSPDDNKF MNATDKKKRK RIFIPPKDND VYEHDKFLFK NVELERAKNS 180
  181 QLFYSKFLNQ MNVLSKILIP TVFDKNFLLL TAQIFFLVMR TWLSLFVAKL DGQIVKNIIA 240
  241 GRGRSFLWDL GCWFLIAVPA SYTNSAIKLL QRKLSLNFRV NLTRYIHDMY LDKRLTFYKL 300
  301 IFDAKASNSV IKNIDNSITN DVAKFCDATC SVFANIAKPV IDLIFFSVYL RDNLGTVGVA 360
  361 GIFVNYFITG FILRKYTPPL GKLAGERSAS DGDYYNYHLN MINNSEEIAF YQGTAVERTK 420
  421 VKELYDVLME KMLLVDKVKF GYNMLEDYVL KYTWSGLGYV FASIPIVMST LATGINSEEK 480
  481 NMKEFIVNKR LMLSLADAGS RLMHSIKDIS QLTGYTNRIF TLLSVLHRVH SLNFNYGAVP 540
  541 SILSIRTEDA SRNSNLLPTT DNSQDAIRGT IQRNFNGIRL ENIDVIIPSV RASEGIKLIN 600
  601 KLTFQIPLHI DPITSKSNSI QDLSKANDIK LPFLQGSGSS LLILGPNGCG KSSIQRIIAE 660
  661 IWPVYNKNGL LSIPSENNIF FIPQKPYFSR GGTLRDQIIY PMSSDEFFDR GFRDKELVQI 720
  721 LVEVKLDYLL KRGVGLTYLD AIADWKDLLS GGEKQRVNFA RIMFHKPLYV VLDEATNAIS 780
  781 VDMEDYLFNL LKRYRFNFIS ISQRPTLIKY HEMLLEIGEN RDGKWQLQAV GTDEAITSID 840
  841 NEIEELERKL ERVKGWEDER TKLREKLEII 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle