YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPO19
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKQILIVAA QSILCSTVFG ERSNVGLSTE ELGGDSILYF NEDPIVIEID KKAIDKKTLE  60
   61 QLASTRDVVL TDLPDTLEFI DFNEYAKMKS KSDMLLEYIN EYEFDDFERS SEGGLEEEEE 120
  121 EDLIYDFNAQ AEDLGKLGSN IYEVVEEKNI VNTYDGNLIN ASTTESTTTI RPFVTSHSYV 180
  181 ASSTPYSNIS SLNEDYDNAS NFLTPTTVAL AVLLTILLFI QAY

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	223	0.94