YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SUR1
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKELKYLIC FNILLLLSII YYTFDLLTLC IDDTVKDAIL EEDLNPDAPP KPQLIPKIIH  60
   61 QTYKTEDIPE HWKEGRQKCL DLHPDYKYIL WTDEMAYEFI KEEYPWFLDT FENYKYPIER 120
  121 ADAIRYFILS HYGGVYIDLD DGCERKLDPL LAFPAFLRKT SPLGVSNDVM GSVPRHPFFL 180
  181 KALKSLKHYD KYWFIPYMTI MGSTGPLFLS VIWKQYKRWR IPKNGTVRIL QPAYYKMHSY 240
  241 SFFSITKGSS WHLDDAKLMK ALENHILSCV VTGFIFGFFI LYGEFTFYCW LCSKNFSNLT 300
  301 KNWKLNAIKV RFVTILNSLG LRLKLSKSTS DTASATLLAR QQKRLRKDSN TNIVLLKSSR 360
  361 KSDVYDLEKN DSSKYSLGNN SS

Type	Start	End	Confidence
Cytoplasmic	1	6	0.81
Transmembrane Helix	7	24	0.78
Non-Cytoplasmic	25	192	0.93
Transmembrane Helix	193	213	0.92
Cytoplasmic	214	265	0.86
Transmembrane Helix	266	288	0.84
Non-Cytoplasmic	289	382	0.78