YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|95103030, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSRCLLVLA AALGVAVAQE SFKCPDDFGF YPHHISCDKY WKCDNGVAEL KTCGNGLAFD  60
   61 ATDSKYLTEN CDYLHNVECG ERTQLEPPIS TPHCSRLYGI FPDENKCDVF WNCWNGEASR 120
  121 YQCSPGLAYD RESRVCMWAD QVPECKNEEV ANGFGCPAPG EVSNAGSFSR HAHPEDCRKY 180
  181 YICLEGVARE YGCPIGTVFK IGDADGTGNC EDPEDVPGCE DYYGELDLKA IRKSELLAGL 240
  241 QADGQPRPNQ PKQLKPRPPK EN

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	262	0.99