YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|207340489
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVMNLFFRP CQLQMGSGPL ELMLKRPTQL TTFMNTRPGG STQIRFISGN LDPVKRREDR  60
   61 LRKIFSKSRL LTRLNKNPKF SHYFDRLSEA GTVPTLTSFF ILHEVTAILP LFLLWWLLYN 120
  121 LDLSDDFKLP NFLNGLMDSC HTAMEKFVGK RYQECLNKNK LILSGTVAYV TVKLLYPVRI 180
  181 FISIWGAPYF GKWLLLPFQK LKHLIKK

Type	Start	End	Confidence
Cytoplasmic	1	95	0.93
Transmembrane Helix	96	118	0.85
Non-Cytoplasmic	119	174	0.94
Transmembrane Helix	175	196	0.83
Cytoplasmic	197	207	0.88