YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190407682
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNEGIGINR DTSTICLREY VFIHFFPVKL ISALTNKTNT MVKLTSIAAG VAAIAAGVAA  60
   61 APATTTLSPS DERVNLVELG VYVSDIRAHL AQYYLFQAAH PTETYPVEIA EAVFNYGDFT 120
  121 TMLTGIPAEQ VTRVITGVPW YSTRLRPAIS SALSKDGIYT AIPK

Type	Start	End	Confidence
Cytoplasmic	1	41	0.79
Transmembrane Helix	42	63	0.79
Non-Cytoplasmic	64	164	0.91