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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FRE5
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFARLVLLL VYLAPGSLAK PASTKKRTQW DQIAIDACAK ELESHKFDTD VKGRHATLCT  60
   61 YEPALGSWLH CAKDVLDSRK KSKKIFEKTF SKINQYCHDY HKDEVVSNEE YYRIFANASL 120
  121 FIRPLDEVKE NIRYPVTPNK ASLDRWVWAY FGPLDNIDKG NVYGVTICLY WIGVLFIAAV 180
  181 YHFLNFSRLK QTVFKNKVSA FLRGHYVLPA LVHNHAMSVG RWFFIGLVPT RLETLVLFGY 240
  241 VLLHGFLLSS YNFDHNELLS DRRSQVLIFL SDRAGILAFA HFPLIVLFGG KNSTMTWLTG 300
  301 IRYTAFITYH KWLGRFMLVD CTIHAIGYTY HAYIENYWKY VKYSDLWTSG RHAMIIVGIL 360
  361 VFFSFFFFRR HYYELFVITH IILAIGFFHA CWKHCYKLGW GEWIMACALF WIADRILRLI 420
  421 KIAIFGMPWA KLKLCGESMI EVRISKSSKW WKAEPGQYIY LYFLRPKIFW QSHPFTVMDS 480
  481 LVEDGELVVV ITVKNGLTKK LQEYLLESEG YTEMRVLAEG PYGQSTRTHL FESLLFIAGG 540
  541 AGVPGPLSMA IKAGRQVKSN DSHQMIKFVW SVRNLDLLEV YRKEIMVLKE LNIDTKIYFT 600
  601 GERKDESNTE EGAIANMSTE GRLLTTSKSA EMITDFGRPN IDEIIEEAVS GAKSLLVTCC 660
  661 GSEGFVDKTR ELTAKRVLEH GDKWIEYVEE FQNW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle