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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GNT1
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLISKRRIR FIVFILFGVL TVFVVSRLVV HFQYNQEIKF YKKYFQQRKD GLHEIYNPLE  60
   61 IKQIPKETID DLYTARLDKE LKNGEVIEWS KFAYVNYVTN ADYLCNTLII FNDLKQEFET 120
  121 KAKLVLLISK DLLDPNTSSN VAYISSLLNK IQAIDEDQVV IKLIDNIVKP KDTTPWNESL 180
  181 TKLLVFNQTE FDRVIYLDND AILRSSLDEL FFLPNYIKFA APLTYWFLSN SDLEKSYHET 240
  241 RHREKQPINL QSYTKVLTKR IGKGQMIYNH LPSLPHSLYL NSNNIAQDII SSTSSLSPLF 300
  301 DFQSSKKVGK LKFASNLMVI NPSKEAFDEI VNVMLPKILN KKEKYDMDLI NEEMYNLKKI 360
  361 IYKQFIFFRK VRKLFKPEVL VLPFARYGLL TGSLRNPRHY SIIYNDVLGY KTLDNDGNDI 420
  421 PVGLNDSVAY SKYIHFSDYP LAKPWNYPSM KEFECIVKEE DAEDSKLEHQ ACDLWNSVYA 480
  481 SYIQSREICL V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle