YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM18
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLFPGLKPV LNASTVIVNP VRAVFPGLVL STKRSFYSIN RLNAENKIND IANTSKEASS  60
   61 SVQMFKPPEF SQFKDSYQKD YERIAKYTLI PLTMVPFYAS FTGGVINPLL DASLSSIFLI 120
  121 YLQYGFTSCI IDYIPKGKYP RWHKLALYCL YGGSMLSLYG IYELETKNNG FVDLVKKLWN 180
  181 ENDDHLYIFG RN

Type	Start	End	Confidence
Cytoplasmic	1	86	0.80
Transmembrane Helix	87	106	0.77
Non-Cytoplasmic	107	113	0.69
Transmembrane Helix	114	134	0.75
Cytoplasmic	135	144	0.72
Transmembrane Helix	145	162	0.61
Non-Cytoplasmic	163	192	0.72