YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113882275, gi...
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSIEQNSVR EILISTAVFA SCLMVAFISQ LVSPSTVIAA TPSTMASNTE MKAQSAVVQA  60
   61 VANPMELDPD NPNPSLFAMA PDTKLADASA LGGPIEAEKP QVTASGLKIT DLVVGTGDEA 120
  121 SSGQNVVVNY RGTLEDGKQF DSSYDRGTPF EFPLGAGRVI KGWDEGVQGM KVGGKRKLVI 180
  181 PPDLGYGQRG AGRVIPPNAT LIFEVELLDI KK

Type	Start	End	Confidence
Cytoplasmic	1	11	0.63
Transmembrane Helix	12	32	0.66
Non-Cytoplasmic	33	212	0.94