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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SLP1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.74
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRLLIYGL ILWVSIIGSF ALDRNKTAQN AKIGLHDTTV ITTGSTTNVQ KEHSSPLSTG  60
   61 SLRTHDFRQA SKVDIRQADI RENGERKEQD ALTQPATPRN PGDSSNSFLS FDEWKKVKSK 120
  121 EHSSGPERHL SRVREPVDPS CYKEKECIGE ELEIDLGFLT NKNEWSEREE NQKGFNEEKD 180
  181 IEKVYKKKFN YASLDCAATI VKSNPEAIGA TSTLIESKDK YLLNPCSAPQ QFIVIELCED 240
  241 ILVEEIEIAN YEFFSSTFKR FRVSVSDRIP MVKNEWTILG EFEARNSREL QKFQIHNPQI 300
  301 WASYLKIEIL SHYEDEFYCP ISLIKVYGKS MMDEFKIDQL KAQEDKEQSI GTNNINNLNE 360
  361 QNIQDRCNNI ETRLETPNTS NLSDLAGALS CTSKLIPLKF DEFFKVLNAS FCPSKQMISS 420
  421 SSSSAVPVIP EESIFKNIMK RLSQLETNSS LTVSYIEEQS KLLSKSFEQL EMAHEAKFSH 480
  481 LVTIFNETMM SNLDLLNNFA NQLKDQSLRI LEEQKLENDK FTNRHLLHLE RLEKEVSFQR 540
  541 RIVYASFFAF VGLISYLLIT RELYFEDFEE SKNGAIEKAD IVQQAIR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle