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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113953489, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRRNDLRRI LLLGSGPIVI GQACEFDYSG TQACKALRAE GYEVILINSN PASIMTDPEM  60
   61 ADRTYVEPLT PDVVTRVIEL ERPDALLPTM GGQTALNLAV ALSKDGTLDR FGVELIGADL 120
  121 KAIQKAEDRQ LFKQAMERIG VHVCPSGIAS TLEEAESVGA SISSYPRIIR PAFTLGGSGG 180
  181 GIAYNPEEFS AICKTGLDAS PVSQILIEKS LLGWKEFELE VMRDLADNVV IVCSIENLDP 240
  241 MGVHTGDSIT VAPAQTLTDR EYQRLRDQSI AIIREIGVAT GGSNIQFAIN PADGEVVVIE 300
  301 MNPRVSRSSA LASKATGFPI AKIAARLAIG YTLDEILNDI TGKTPACFEP TIDYVVTKVP 360
  361 RFAFEKFRGS PAVLTTAMKS VGEAMAIGRC FEESFQKALR SLETGLSGWG GDRPEPSCSK 420
  421 TDLERSLRTP SPDRILAVRS AMLSGMTDAH IHELSHIDPW FLAKLRGLID AESDLLKGKS 480
  481 LEDLDETILF KLKTLGYSDR QIAWFVDSKE LNVRERRDQL GVTPVFKTVD TCAAEFASST 540
  541 PYHYSTYERP LFRLKPDGLL QPMAPSTEVA TETRPKLMIL GGGPNRIGQG IEFDYCCCHA 600
  601 SFSAQDQGFA TVMLNSNPET VSTDYDSSDR LYFEPITLED VLNVIEAERP NGVIVQFGGQ 660
  661 TPLKLALSLL NWLSTPQGKA TGTQIWGTSP ASIDLAEDRE QFEAILRKLE IRQPRNGLAR 720
  721 SEVEARSIAG NVGYPVVVRP SYVLGGRAME VVYDEEELNR YMKEAVQVEP DHPVLIDQYL 780
  781 ENAVEVDVDA LCDHEGTVVI GGLMEHIEPA GIHSGDSACC LPSISLSEDA LSLIRRWSEA 840
  841 LAITLKVQGL INLQFAVQRA ADGQEKVFII EANPRASRTV PFVAKATGVP LARLATRLMA 900
  901 GETLSQVGLL KEPVPPLQTV KEAVLPFRRF PGSDSLLGPE MRSTGEVMGS ASDFGMAFAK 960
  961 AELAAGEALP TTGTVFLSTH DRDKPALVPV ARQLIGLGFQ LMATSGTAQA LRNEGLQVES1020
 1021 VLKVHEGRPN IEDLIRSGGV QLVINTPIGR QAAHDDRYLR RAALDYSVPT LTTLAGARAA1080
 1081 VEAIEALQTR TIVIHALQDV HASLSGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle