YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YOR139C
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNCLTKLVI LVCLKYVAKA LLNRSTGLIM KDKPEGVHHI KSCSDSSSRI WYSLWMNIAF  60
   61 CGGLGPTSIF DPCFLTSSAP SPPSAPALAI PAAAPPLPTS VPAGAGVEAG AGAETVSSSL 120
  121 MIFSSFFLYN

Type	Start	End	Confidence
Cytoplasmic	1	50	0.82
Transmembrane Helix	51	70	0.77
Non-Cytoplasmic	71	108	0.81
Transmembrane Helix	109	129	0.57
Cytoplasmic	130	130	0.63