YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OST2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNMAKAPKA NTPKVTSTSS AVLTDFQETF KTSKRAYFAQ IEKYPKLKLI DTFCFFLVLL  60
   61 GVIQCTFIIL IRDNFPFNAF LAGFIICVGQ FVLLMSLRLQ LCNSFPGISK NRAFAEFIVA 120
  121 SLILHFVCLH FIN

Type	Start	End	Confidence
Cytoplasmic	1	48	0.99
Transmembrane Helix	49	71	0.91
Non-Cytoplasmic	72	78	0.83
Transmembrane Helix	79	99	0.93
Cytoplasmic	100	112	0.83
Transmembrane Helix	113	132	0.90
Non-Cytoplasmic	133	133	0.96