YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YOR082C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVVYMCIWV LYLLLFLFLF LFIASPASLR RSQTHILQCL YYFSLLLISG CAFFHQVLCL  60
   61 VLPLFCFVLF CFFYFFRSAL EVFASLFPLP FSTRSHETIS KSRIIIKAAR GII

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.58
Transmembrane Helix	8	29	0.89
Cytoplasmic	30	38	0.56
Transmembrane Helix	39	58	0.77
Non-Cytoplasmic	59	59	0.27
Transmembrane Helix	60	87	0.67
Cytoplasmic	88	113	0.73