YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UFE1
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSDLTPIFR KYVAVIDDAR NEQNGIDDHV ERKQEDFGNS NETCEMFRDS FIKECARLLK  60
   61 FLVELNKVIK QIEKNYLDDF NMSDAEKDEF DMECRLQIQQ YFKKFEFLEN YEMERHNLSL 120
  121 KRFQSKSHRW SKILSNKNDN TKHVIHPQDI ENGVYEFRLG VLRCLNLWIK YVSSKFTTIQ 180
  181 QERLILENKM NFNSTPMPTL SNNADDFSAD AIDISVSQSA PVETVQDEVK HYEETISKLT 240
  241 QEQLQVLETE HSELLNQKNE QLKKVETINK TILDIVNIQN ELSNHLTVQS QNINLMLNNQ 300
  301 DDIELNIKKG NKELRKAKRA AGRTAKMTTY GAIIMGVFIL FLDYVG

Type	Start	End	Confidence
Cytoplasmic	1	323	0.90
Transmembrane Helix	324	342	0.86
Non-Cytoplasmic	343	346	0.65