YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113888526, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLTNLVRP LVALACGLVL SASFALQAAS FEEGKDYVTV AGISEAQKPV LREFFSYNCP  60
   61 HCYKQEPFVA STVKLLGKDV AFERTPVGAG RPAWELSQLA YFVAQKLKMT KQVHEAIFKQ 120
  121 IHEKGEQFTR PEQVKAFFVA QGAKADDVDA AMNSVDAKFS VMNYDSQAQL SGIKGVPSLL 180
  181 VNGRYLITSK VHTPEELAEL VKFLAAK

Type	Start	End	Confidence
Signal Peptide	1	28	0.98
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	207	0.99