YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DFG16
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIRLHFYYL LTLVYHLGLV GAYEKAARKR IQPPDLIPGP PGHKLGDERP PHYDHRPPYK  60
   61 KHIDNIPAYN LTDLIDDKLL NKYENSCTVN VLTGGFISLA SNSWHLRAYN YTLNYPSFLI 120
  121 RCDNGSANPN FSHVLQDFVY DINNKFNVQD DSSKYIGKDP FPLGMIMITF ASGCICVATW 180
  181 MLFLVVLLLP SDNHNRRNKV VHVYVLFSAI IRTVFLNETI AVIFDSQYHD DYQDASQFES 240
  241 FIVETAPYKI CELVANILSD INWIYIVHYL QSNYGKPTWN WIPFKMKKGT HIIITVGCFL 300
  301 SLADNILFAN LLWRKNLVVL KVFYKLIELL IYTIFISIIC YFTWHNFAYI LLPKTAEINT 360
  361 DGKCKTKLRI LWENYHETIP LLAYNILIFI LFYFTTIFFA AFTKHVRGWT FNFVHLLKVL 420
  421 ITVNVWGLIG VLEKRELHIS KKTVLGRKIN NRDKFFANPT VNYYGEDLGK HLSAITLNRD 480
  481 LNTTKSNTTS HDSSSLVGSP SPTWKSPIER IRDRRRRHKI MKSENKFGQN PSFGSKSNGK 540
  541 PNTKTTLSKY RQLLRKPRRK TNSYEPKNGI GQNKEGSTVR PGADKHIRDS NYLATDISDN 600
  601 ESMETELRTN HIYNYENSD

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.55
Transmembrane Helix	5	23	0.51
Cytoplasmic	24	86	0.80
Transmembrane Helix	87	106	0.69
Non-Cytoplasmic	107	165	0.87
Transmembrane Helix	166	189	0.91
Cytoplasmic	190	199	0.86
Transmembrane Helix	200	222	0.74
Non-Cytoplasmic	223	288	0.87
Transmembrane Helix	289	312	0.89
Cytoplasmic	313	321	0.85
Transmembrane Helix	322	345	0.84
Non-Cytoplasmic	346	380	0.87
Transmembrane Helix	381	402	0.94
Cytoplasmic	403	410	0.78
Transmembrane Helix	411	432	0.80
Non-Cytoplasmic	433	619	0.81