YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ERP4
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVFTLIAIL FSSSLLTHAF SSNYAPVGIS LPAFTKECLY YDLSSDKDVL VVSYQVLTGG  60
   61 NFEIDFDITA PDGSVIVTER QKKHSDFLLK SFGIGKYTFC LSNNYGTSPK KVEITLEKEK 120
  121 EIVSSHESKE DIIANNAIEE IDRNLNKITK TMDYLRAREW RNMYTVSSTE SRLTWLSLLI 180
  181 MGVMVGISIV QALIIQFFFT SRQKNYV

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	174	0.99
Transmembrane Helix	175	199	0.88
Cytoplasmic	200	207	0.95