YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YOL163W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAWSLVATL QCKMTGKSSF YTCRALMGLF EGGFVADLVL WMSYFYSSSE LSIRLSFFWV  60
   61 TLSLTQIITS IVAFGVFHMR GIGGMAGWQW LFLIERIFTL VIGISAYFLM VPSVVQTKKP 120
  121 WSKKGWFTER EEKIIVNKIL RDDPTKGDMN NRQGMSLKML WQGITDYYI

Type	Start	End	Confidence
Cytoplasmic	1	19	0.69
Transmembrane Helix	20	42	0.83
Non-Cytoplasmic	43	54	0.55
Transmembrane Helix	55	78	0.88
Cytoplasmic	79	91	0.48
Transmembrane Helix	92	111	0.90
Non-Cytoplasmic	112	169	0.60