YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YOL162W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLAYIPTN VLATYLTLVL RSIGFTTFQA NLLAIPNFVL HILLLFGLTW STEKCNNRLG  60
   61 LSLLQPLYTV PLLAVLRFWK GTMFNKWGTY AIITLILDNP YIHAICVSLC SRNSQSVKTR 120
  121 TVSTCLYNMF VQAGLIISSN IYAKSDAPLY RKGNGVLFGL ALFMFPILIG SKLIYVYINK 180
  181 QRDKRWNAMS EEEKDHYLST TSDAGSRRLD FRFYH

Type	Start	End	Confidence
Cytoplasmic	1	6	0.54
Transmembrane Helix	7	25	0.56
Non-Cytoplasmic	26	31	0.53
Transmembrane Helix	32	50	0.89
Cytoplasmic	51	58	0.70
Transmembrane Helix	59	79	0.80
Non-Cytoplasmic	80	87	0.72
Transmembrane Helix	88	110	0.74
Cytoplasmic	111	123	0.76
Transmembrane Helix	124	143	0.84
Non-Cytoplasmic	144	155	0.87
Transmembrane Helix	156	176	0.95
Cytoplasmic	177	215	0.96