YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSF3
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYPSLRVLR DKCRRVVKIA MELMPTLFLV LYFYNRRASI ERMGYYDIDD VLADGTEFPC  60
   61 KFQYDIPGLG YLENNPGRPI TKNTKLSLPL WLARILAIVG GDEALVDEEP VPFVELLPPD 120
  121 MFSTKVMNAI KTDPVALDLH SINSHFFSLA IKWIMLFSEK ELANVVSELL LQRAQELNHH 180
  181 ASSLSIDLNA DSTGKNSANT NIATSTFLLK LEEMEKEIYK KSHESYKDTK RWMFKK

Type	Start	End	Confidence
Cytoplasmic	1	15	0.66
Transmembrane Helix	16	34	0.67
Non-Cytoplasmic	35	236	0.98