YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YOL107W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYSSRFLEL NIPDSFLNIN KIPDATKFIT VTYICLTATL FCIRRSLYNK LVLEDPNLDY  60
   61 NLITSPLLQM VPSQIWRYPT SLVLSNFIDT KAWKVVVNLL NLIIGGSFIE RNWNSSKEMF 120
  121 KFIIVLGSLT NVLIIMLTLL VSFFSNKVRL DIPLDGNYTI LIGFPIIYRQ LLPETTIIHL 180
  181 KTPQFLAKNF RFKLLPIFVM FTMTVTQIIW FHHFAQLFSI WVTFFASWSY LRFFQKLAPL 240
  241 NCPSLPTTNS QGGQEILVGD ASDTFQLIYF FPDLIKPILR PIFNFIYNVV VVKFKVIKPF 300
  301 HDIDIDIGNT IAESRGAKKI MTVEERRRQL ALQVLEERMV NP

Type	Start	End	Confidence
Cytoplasmic	1	121	0.72
Transmembrane Helix	122	144	0.92
Non-Cytoplasmic	145	153	0.73
Transmembrane Helix	154	172	0.73
Cytoplasmic	173	191	0.80
Transmembrane Helix	192	211	0.86
Non-Cytoplasmic	212	216	0.59
Transmembrane Helix	217	234	0.73
Cytoplasmic	235	342	0.79