YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YOL092W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLVPLELNR STLSGISGSI SISCWIIVFV PQIYENFYRK SSDGLSLLFV VLWLAGDVFN  60
   61 LMGAVMQHLL STMIILAAYY TVADIILLGQ CLWYDNEEKP AVDPIHLSPA NPINENVLHD 120
  121 VFNEQQPLLN SQGQPNRIDE EMAAPSSDGN AGDDNLREVN SRNLIKDIFI VSGVVFVGFI 180
  181 SWYVTYCVNY TQPPPVEDPS LPVPELQINW MAQIFGYLSA LLYLGSRIPQ ILLNFKRKSC 240
  241 EGISFLFFLF ACLGNTTFIF SVIVISLDWK YLIMNASWLV GSIGTLFMDF VIFSQFFIYK 300
  301 RNKKFILN

Type	Start	End	Confidence
Cytoplasmic	1	11	0.47
Transmembrane Helix	12	34	0.85
Non-Cytoplasmic	35	44	0.46
Transmembrane Helix	45	79	0.68
Cytoplasmic	80	166	0.90
Transmembrane Helix	167	186	0.94
Non-Cytoplasmic	187	207	0.91
Transmembrane Helix	208	226	0.90
Cytoplasmic	227	244	0.81
Transmembrane Helix	245	267	0.92
Non-Cytoplasmic	268	275	0.84
Transmembrane Helix	276	299	0.89
Cytoplasmic	300	308	0.99