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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PHM7_YEAST
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSSSTSAF ISTLIIYGLT AVVFVWLFLL LRPKNRRVYE PRSLKDIQTI PEEERTEPVP  60
   61 EGYFGWVEYL LSKPHSFLIQ HTSVDGYFLL RYIGIVGSLS FVGCLLLLPI LLPVNATNGN 120
  121 NLQGFELLSF SNVTNKNRFY AHVFLSWIFF GLFTYVIYKE LYYYVVFRHA MQTTPLYDGL 180
  181 LSSRTVIVTE LHKSIAQEGE MQMRFPKASN VAFAYDLSDL QELCKERAKN AAKYEAALNK 240
  241 VLNKCVKMTR NKTQKQLDKL YNNGTKPKDD LETYVPHKKR PKHRLGKLPL CLGGKKVNTL 300
  301 SYSSKRIGEL NEEIHEKQAD WASNDRQPAC FIQFETQLEA QRCYQSVEAI LGKKNFGKRL 360
  361 IGYSPEDVNW GSMRLSSKER HSRRAVANTI MVLLIIFWAF PVAVVGIISN VNFLTDKVPF 420
  421 LRFINNMPTF LMGVITGLLP TIALVVLMSL VPPFIVMLGK LSGCVTRQET DLYSQAWYYA 480
  481 FAVIQIFLVV TATSSASSTV DSIIDRPRSA MTLLANNLPK ASNFYIMYFI LKGLTGPTWT 540
  541 ILQAVNLLLS KVLGRVLDST PRQKWNRYNT LATPRMGIVY PGIEILVCIY ICYSIIAPIL 600
  601 LFFSTVMLTL LYVAYLYNLN YVFGFSFDLK GRNYPRALFQ IFVGIYLSEV CLLGLFIMAK 660
  661 TWGPLVLEVF WIVVTALAHI YMKRKFIPLF DAVPLSAIRH ARGEPGYSYP TSDLGLQEIK 720
  721 DIADEMKGKY EQDNTHGILT PVTKDDLKKA NLIPDNDGSS ENGTPSNPFE SGSERASLSG 780
  781 SNAESDSIKK LNDTVIKKSS TLSSSTKDNN ESTFVPEGEK FRKFHYSDVE ALRNKRPYDE 840
  841 DDHSKHGPEG AVPVNADAGV IYSDPAAVMK EPQAFPPDVL ETNTWTRRIL QFFNPRRSYP 900
  901 FDSVRMRFPL VFNTSIEYDE EYLSSAYTDP CVREKDPIVW CCKDPLGVSK QQIQEARSNG 960
  961 LDVRDDFTRY DEKGKVIFTY NPPDYEPEAK K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle