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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58198731
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRAIIRRR KYLLDHVNTP ILSSSSSSFR HGTFGFKPEP RIAQPFLEQS LGDSKSEKEK  60
   61 EQYSVDLTKG GLLGPDNGLL RRPAHVISHY GYGIGRNEFT LPFGARGLLQ SVRKASTATA 120
  121 GQPKLDIEEQ GDENQNKRKK EASPEECDQA VEGLSTAKAK AKAKQVQDSL KADQSIVKKF 180
  181 WARLLGIGPA LRAVASMSRA DWAAKLKHGK DEFISTLQHY WLGTKLLWAD IRISSRLLVK 240
  241 LAGGKSLSRR ERQQLTRTTA DIFRLVPVAV FIVVPFMEFL LPVFLKLFPN MLPSTFQDKM 300
  301 KEEEALKRKL KARMEYAKFL QDTAKEMAKE VQTSRSGETK QTAEDLDEFL NKVRKGERVS 360
  361 NDEILSFAKL FNDELTLDNM SRARLVNMCK YMGIRLFGTD HYLRFMLRKK LRDIKNDDKM 420
  421 IQAEGVDSLP EEELRQACRD RGHLGLRSTE EMRQQLRDWL DLSLNHAVPS SLLILSRAFT 480
  481 LAGRMKPEDA VVATLSSLPD EVVDTIGTVL PSEDSVSERR RKLEFLEMQE ELIKEEEKKK 540
  541 EKEEKAKQKK EEKANLTEQE AAEEDLALKE MTEPTAREEE ELTEAKQHDK EQLCNISRAL 600
  601 AVLASASSVS KERQEFLSLV NKEIKLYNSM LEREDTDGAE EAKKAYMAAR EESGDTTEVA 660
  661 SEEKVSSALI DKVDAMLQEL EKEIDDVDAQ IGNRWQLLDR DHDGKVTPEE VAAAAAYLKD 720
  721 TIGKEGVQEL ISKLSKDKEG KIRVEDIVKL GSQAEENNED DEEEARH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle