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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YOL075C
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQENGDVA TELIENRLSF SRIPRISLHV RDLSIVASKT NTTLVNTFSM DLPSGSVMAV  60
   61 MGGSGSGKTT LLNVLASKIS GGLTHNGSIR YVLEDTGSEP NETEPKRAHL DGQDHPIQKH 120
  121 VIMAYLPQQD VLSPRLTCRE TLKFAADLKL NSSERTKKLM VEQLIEELGL KDCADTLVGD 180
  181 NSHRGLSGGE KRRLSIGTQM ISNPSIMFLD EPTTGLDAYS AFLVIKTLKK LAKEDGRTFI 240
  241 MSIHQPRSDI LFLLDQVCIL SKGNVVYCDK MDNTIPYFES IGYHVPQLVN PADYFIDLSS 300
  301 VDSRSDKEEA ATQSRLNSLI DHWHDYERTH LQLQAESYIS NATEIQIQNM TTRLPFWKQV 360
  361 TVLTRRNFKL NFSDYVTLIS TFAEPLIIGT VCGWIYYKPD KSSIGGLRTT TACLYASTIL 420
  421 QCYLYLLFDT YRLCEQDIAL YDRERAEGSV TPLAFIVARK ISLFLSDDFA MTMIFVSITY 480
  481 FMFGLEADAR KFFYQFAVVF LCQLSCSGLS MLSVAVSRDF SKASLVGNMT FTVLSMGCGF 540
  541 FVNAKVMPVY VRWIKYIAFT WYSFGTLMSS TFTNSYCTTD NLDECLGNQI LEVYGFPRNW 600
  601 ITVPAVVLLC WSVGYFVVGA IILYLHKIDI TLQNEVKSKQ KKIKKKSPTG MKPEIQLLDD 660
  661 VYHQKDLEAE KGKNIHITIK LEDIDLRVIF SAPFSNWKEG NFHHETKEIL QSVNAIFKPG 720
  721 MINAIMGPSG SGKSSLLNLI SGRLKSSVFA KFDTSGSIMF NDIQVSELMF KNVCSYVSQD 780
  781 DDHLLAALTV KETLKYAAAL RLHHLTEAER MERTDNLIRS LGLKHCENNI IGNEFVKGIS 840
  841 GGEKRRVTMG VQLLNDPPIL LLDEPTSGLD SFTSATILEI LEKLCREQGK TIIITIHQPR 900
  901 SELFKRFGNV LLLAKSGRTA FNGSPDEMIA YFTELGYNCP SFTNVADFFL DLISVNTQNE 960
  961 QNEISSRARV EKILSAWKAN MDNESLSPTP ISEKQQYSQE SFFTEYSEFV RKPANLVLAY1020
 1021 IVNVKRQFTT TRRSFDSLMA RIAQIPGLGV IFALFFAPVK HNYTSISNRL GLAQESTALY1080
 1081 FVGMLGNLAC YPTERDYFYE EYNDNVYGIA PFFLAYMTLE LPLSALASVL YAVFTVLACG1140
 1141 LPRTAGNFFA TVYCSFIVTC CGERLGIMTN TFFERPGFVV NCISIILSIG TQMSGLMSLG1200
 1201 MSRVLKGFNY LNPVGYTSMI IINFAFPGNL KLTCEDGGKN SDGTCEFANG HDVLVSYGLV1260
 1261 RNTQKYLGII VCVAIIYRLI AFFILKAKLE WIKW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle