YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YOL019W
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNSSVVFF LVGLSQFVTM AFLIIGSITA PIFKQIGYSK YDEITYGTFG YCKEGSCSKA  60
   61 SYNYHPDELS DSDSNWKLNS NARSILGKII FITPIAAGLN FLGFLCTIMS VLLINVLSSD 120
  121 RVGSASAIMF FVNLTFSTLG FLSASLICIV VFLLFYPHVT WCSWVLIPGA ALSLLVIPLI 180
  181 FSAYSRSSGS RDDDETEELE EKGMLLNDPY LSSKSGRFDI DADSEANLRG DSRTNLLGDN 240
  241 FKNGTNITVV PDIISHNQDP KLSNITTSTT SDISTFDKEA KDMENSNGSG LNEEEDDGMA 300
  301 YDKRRSTSTY SVIESESGLK NGSVSNNYVR NNGSNTSNNI NYKVPLGKTE ISSSASLASS 360
  361 DYSQREVIPH RNPSRLLNDI METSFNEPND SHINSMSSYN DKDSTLTSIS QRGVNPEVYN 420
  421 QMPRETAAGP ANIRPYAGQP HPAPLVYPQQ RLQPQQQQPQ QQYHQYNLYQ RTTPAGPDPS 480
  481 NVILQSNPYF NVAPNQVPQH RNPVPGVGFA PNPLPNQSPI TQGYKPAYKR RMQNKNLPRA 540
  541 TTSLNNPYGF R

Type	Start	End	Confidence
Cytoplasmic	1	6	0.69
Transmembrane Helix	7	30	0.87
Non-Cytoplasmic	31	89	0.70
Transmembrane Helix	90	117	0.82
Cytoplasmic	118	129	0.62
Transmembrane Helix	130	155	0.88
Non-Cytoplasmic	156	160	0.58
Transmembrane Helix	161	182	0.90
Cytoplasmic	183	551	0.71