YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YNR061C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLTTTSVT FHVLRYFQLG LSVTNLLLAS FAIITNYKVD RILRLSLAVS IISSVYFGIV  60
   61 RFLPVLLIFV MEIVQTVLWF TAFVTLASKF GSMSCSSMPR GINFDYSGSC KIAKIDILPE 120
  121 AVLFILFLAT TYASYITVLS QAKENGSSTR SVLKACVKAL RDTVDRLETS LEESEPLLDL 180
  181 EVQEDARTET ESIEDSTDSE DNANIEQEKV IDGSIEHSS

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.73
Transmembrane Helix	16	35	0.91
Cytoplasmic	36	44	0.62
Transmembrane Helix	45	70	0.78
Non-Cytoplasmic	71	72	0.50
Transmembrane Helix	73	93	0.77
Cytoplasmic	94	116	0.70
Transmembrane Helix	117	139	0.69
Non-Cytoplasmic	140	219	0.68